Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Gm27486-201ENSMUST00000184923 80 ntBASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pcdhb22Q91XZ8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb22Q91XZ8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Gm8810-201ENSMUST00000172895 754 ntBASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb22Q91XZ8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhb22Q91XZ8 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms