Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Gm15770-201ENSMUST00000117498 584 ntBASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Gm15321-201ENSMUST00000121290 288 ntBASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Auts2-212ENSMUST00000178555 309 ntBASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhga3Q91XY5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Gm10576-201ENSMUST00000191927 825 ntBASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga3Q91XY5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga3Q91XY5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pcdhga3Q91XY5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga3Q91XY5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga3Q91XY5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga3Q91XY5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms