Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh18Q8VHR0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh18Q8VHR0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh18Q8VHR0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh18Q8VHR0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh18Q8VHR0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Gm23935-201ENSMUST00000102303 57 ntBASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Gm24270-201ENSMUST00000102326 57 ntBASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Gm24245-201ENSMUST00000157318 57 ntBASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Gm29541-201ENSMUST00000191351 678 ntBASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Gm10253-201ENSMUST00000194270 940 ntBASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh18Q8VHR0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh18Q8VHR0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh18Q8VHR0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.83□□□□□ -0.35
Pcdh18Q8VHR0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh18Q8VHR0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh18Q8VHR0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh18Q8VHR0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh18Q8VHR0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Gm18027-201ENSMUST00000218947 619 ntBASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh18Q8VHR0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh18Q8VHR0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms