Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdhr1Q8VHP6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr1Q8VHP6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Gm38319-201ENSMUST00000194537 1266 ntBASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Gm37497-201ENSMUST00000195830 798 ntBASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Gm45880-201ENSMUST00000213041 853 ntBASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Gm2824-203ENSMUST00000226189 1228 ntBASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr1Q8VHP6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms