Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rpa1Q8VEE4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Gm13015-201ENSMUST00000118674 204 ntBASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Gm6916-202ENSMUST00000205523 195 ntBASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa1Q8VEE4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm43371-201ENSMUST00000202838 1031 ntBASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm18049-201ENSMUST00000208909 581 ntBASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa1Q8VEE4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa1Q8VEE4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms