Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn1Q8K0T0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.33■□□□□ 0.05
Rtn1Q8K0T0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.33■□□□□ 0.05
Rtn1Q8K0T0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gm14350-201ENSMUST00000116642 640 ntBASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gm6991-201ENSMUST00000218475 1178 ntBASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gm18515-201ENSMUST00000219755 797 ntBASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn1Q8K0T0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Gm38671-201ENSMUST00000200573 130 ntBASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Gm7287-201ENSMUST00000205267 602 ntBASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn1Q8K0T0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Gm13612-201ENSMUST00000119276 390 ntBASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Gm5356-201ENSMUST00000093326 615 ntBASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms