Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm12490-201ENSMUST00000120255 560 ntBASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm28911-201ENSMUST00000188837 117 ntBASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm42550-201ENSMUST00000201553 960 ntBASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfwd3Q8CIK8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm15429-201ENSMUST00000151268 798 ntBASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm45384-201ENSMUST00000210451 277 ntBASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm6983-201ENSMUST00000214912 628 ntBASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rfwd3Q8CIK8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms