Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Gm7857-201ENSMUST00000117957 358 ntBASIC14.94□□□□□ -0.02
Syne4Q8CII8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.94□□□□□ -0.02
Syne4Q8CII8 Gm12134-201ENSMUST00000122109 520 ntBASIC14.94□□□□□ -0.02
Syne4Q8CII8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Syne4Q8CII8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.94□□□□□ -0.02
Syne4Q8CII8 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.94□□□□□ -0.02
Syne4Q8CII8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Syne4Q8CII8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Gm15547-201ENSMUST00000122152 333 ntBASIC14.93□□□□□ -0.02
Syne4Q8CII8 Gm22121-201ENSMUST00000175148 54 ntBASIC14.93□□□□□ -0.02
Syne4Q8CII8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Gm27046-201ENSMUST00000182160 463 ntBASIC14.93□□□□□ -0.02
Syne4Q8CII8 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.93□□□□□ -0.02
Syne4Q8CII8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.93□□□□□ -0.02
Syne4Q8CII8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.93□□□□□ -0.02
Syne4Q8CII8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.93□□□□□ -0.02
Syne4Q8CII8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Syne4Q8CII8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.92□□□□□ -0.02
Syne4Q8CII8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Gm13665-201ENSMUST00000120830 528 ntBASIC14.92□□□□□ -0.02
Syne4Q8CII8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.92□□□□□ -0.02
Syne4Q8CII8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syne4Q8CII8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.91□□□□□ -0.02
Syne4Q8CII8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syne4Q8CII8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms