Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Acot6-202ENSMUST00000222921 3622 ntBASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Mir7085-201ENSMUST00000184353 66 ntBASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Gm6458-201ENSMUST00000211573 635 ntBASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Gm40466-201ENSMUST00000212174 422 ntBASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Alx1Q8C8B0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Alx1Q8C8B0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Gm1335-201ENSMUST00000121653 386 ntBASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx1Q8C8B0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Gm18062-201ENSMUST00000208020 547 ntBASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Gm18055-201ENSMUST00000208254 547 ntBASIC15.44■□□□□ 0.06
Alx1Q8C8B0 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx1Q8C8B0 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Gm10268-201ENSMUST00000085340 555 ntBASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms