Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Gm14017-201ENSMUST00000121934 386 ntBASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a6Q8C6K9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a6Q8C6K9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.96□□□□□ -0.5
Col6a6Q8C6K9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a6Q8C6K9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a6Q8C6K9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a6Q8C6K9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a6Q8C6K9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a6Q8C6K9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a6Q8C6K9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col6a6Q8C6K9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm3096-201ENSMUST00000185770 364 ntBASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Snord83b-201ENSMUST00000104546 94 ntBASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm13665-201ENSMUST00000120830 528 ntBASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a6Q8C6K9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a6Q8C6K9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms