Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.12□□□□□ -0.31
Ubp1Q811S7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubp1Q811S7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubp1Q811S7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.12□□□□□ -0.31
Ubp1Q811S7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ubp1Q811S7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubp1Q811S7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubp1Q811S7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubp1Q811S7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubp1Q811S7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ubp1Q811S7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubp1Q811S7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Gm12928-201ENSMUST00000117115 573 ntBASIC13.11□□□□□ -0.31
Ubp1Q811S7 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.11□□□□□ -0.31
Ubp1Q811S7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Gm44397-201ENSMUST00000195950 113 ntBASIC13.11□□□□□ -0.31
Ubp1Q811S7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.11□□□□□ -0.31
Ubp1Q811S7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.11□□□□□ -0.31
Ubp1Q811S7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.11□□□□□ -0.31
Ubp1Q811S7 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.11□□□□□ -0.31
Ubp1Q811S7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.11□□□□□ -0.31
Ubp1Q811S7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubp1Q811S7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.1□□□□□ -0.31
Ubp1Q811S7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.1□□□□□ -0.31
Ubp1Q811S7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.1□□□□□ -0.31
Ubp1Q811S7 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.1□□□□□ -0.31
Ubp1Q811S7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms