Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Gm11745-201ENSMUST00000121669 448 ntBASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Gm9719-201ENSMUST00000162765 543 ntBASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Mir8117-201ENSMUST00000184773 107 ntBASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TwistnbQ78WZ7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Gm5566-201ENSMUST00000116118 459 ntBASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Gm13385-201ENSMUST00000121089 220 ntBASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Mir3113-201ENSMUST00000175478 76 ntBASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Mir7221-201ENSMUST00000184009 72 ntBASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Gm45841-201ENSMUST00000207700 164 ntBASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Gm45612-201ENSMUST00000211320 160 ntBASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TwistnbQ78WZ7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Gm15770-201ENSMUST00000117498 584 ntBASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Gm18766-201ENSMUST00000189811 808 ntBASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Gm33320-201ENSMUST00000192232 530 ntBASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TwistnbQ78WZ7 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms