Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Gm37153-201ENSMUST00000193637 231 ntBASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Gm42571-201ENSMUST00000201197 2464 ntBASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Gm11780-201ENSMUST00000136880 516 ntBASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Gm4535-201ENSMUST00000182274 558 ntBASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Gm10355-201ENSMUST00000097146 517 ntBASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccbe1Q3MI99 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Gm18262-201ENSMUST00000222560 1946 ntBASIC12□□□□□ -0.49
Ccbe1Q3MI99 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Gm7230-201ENSMUST00000173026 815 ntBASIC12□□□□□ -0.49
Ccbe1Q3MI99 Gm27628-201ENSMUST00000184911 107 ntBASIC12□□□□□ -0.49
Ccbe1Q3MI99 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccbe1Q3MI99 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms