Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.88□□□□□ -0.67
Trim63Q38HM4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.88□□□□□ -0.67
Trim63Q38HM4 Gm27011-201ENSMUST00000182352 972 ntBASIC10.88□□□□□ -0.67
Trim63Q38HM4 Gm2445-201ENSMUST00000182798 989 ntBASIC10.88□□□□□ -0.67
Trim63Q38HM4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.88□□□□□ -0.67
Trim63Q38HM4 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Gm13168-201ENSMUST00000121771 632 ntBASIC10.87□□□□□ -0.67
Trim63Q38HM4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Gm9182-201ENSMUST00000217829 639 ntBASIC10.87□□□□□ -0.67
Trim63Q38HM4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.87□□□□□ -0.67
Trim63Q38HM4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trim63Q38HM4 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.86□□□□□ -0.67
Trim63Q38HM4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.86□□□□□ -0.67
Trim63Q38HM4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms