Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.14□□□□□ -0.63
Npas1P97459 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.14□□□□□ -0.63
Npas1P97459 Gm9727-201ENSMUST00000161387 555 ntBASIC11.14□□□□□ -0.63
Npas1P97459 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.14□□□□□ -0.63
Npas1P97459 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.14□□□□□ -0.63
Npas1P97459 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.14□□□□□ -0.63
Npas1P97459 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Npas1P97459 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Npas1P97459 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.14□□□□□ -0.63
Npas1P97459 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.14□□□□□ -0.63
Npas1P97459 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npas1P97459 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.13□□□□□ -0.63
Npas1P97459 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.13□□□□□ -0.63
Npas1P97459 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Npas1P97459 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Npas1P97459 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.13□□□□□ -0.63
Npas1P97459 Gm11025-201ENSMUST00000140773 466 ntBASIC11.13□□□□□ -0.63
Npas1P97459 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.13□□□□□ -0.63
Npas1P97459 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Npas1P97459 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.13□□□□□ -0.63
Npas1P97459 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.13□□□□□ -0.63
Npas1P97459 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Npas1P97459 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Npas1P97459 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Npas1P97459 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.13□□□□□ -0.63
Npas1P97459 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npas1P97459 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.13□□□□□ -0.63
Npas1P97459 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Npas1P97459 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Npas1P97459 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.12□□□□□ -0.63
Npas1P97459 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Gm2810-201ENSMUST00000118681 990 ntBASIC11.12□□□□□ -0.63
Npas1P97459 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.12□□□□□ -0.63
Npas1P97459 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Npas1P97459 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.12□□□□□ -0.63
Npas1P97459 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.12□□□□□ -0.63
Npas1P97459 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.12□□□□□ -0.63
Npas1P97459 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.12□□□□□ -0.63
Npas1P97459 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Npas1P97459 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.12□□□□□ -0.63
Npas1P97459 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npas1P97459 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms