Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Gm8908-201ENSMUST00000121633 1024 ntBASIC16.56■□□□□ 0.24
Nkx2-3P97334 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Gm8885-201ENSMUST00000189382 598 ntBASIC16.56■□□□□ 0.24
Nkx2-3P97334 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.56■□□□□ 0.24
Nkx2-3P97334 AA914427-201ENSMUST00000193194 1166 ntBASIC16.56■□□□□ 0.24
Nkx2-3P97334 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.56■□□□□ 0.24
Nkx2-3P97334 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.56■□□□□ 0.24
Nkx2-3P97334 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.56■□□□□ 0.24
Nkx2-3P97334 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.56■□□□□ 0.24
Nkx2-3P97334 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-3P97334 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Gm10434-201ENSMUST00000101158 471 ntBASIC16.55■□□□□ 0.24
Nkx2-3P97334 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Gm38317-201ENSMUST00000195564 343 ntBASIC16.55■□□□□ 0.24
Nkx2-3P97334 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-3P97334 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.54■□□□□ 0.24
Nkx2-3P97334 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Gm24990-201ENSMUST00000157406 323 ntBASIC16.54■□□□□ 0.24
Nkx2-3P97334 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Gm31256-201ENSMUST00000194705 506 ntBASIC16.54■□□□□ 0.24
Nkx2-3P97334 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.54■□□□□ 0.24
Nkx2-3P97334 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Gm22058-201ENSMUST00000083393 310 ntBASIC16.54■□□□□ 0.24
Nkx2-3P97334 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.54■□□□□ 0.24
Nkx2-3P97334 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-3P97334 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-3P97334 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms