Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Msh6P54276 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.69■□□□□ 0.26
Msh6P54276 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Msh6P54276 Gm24990-201ENSMUST00000157406 323 ntBASIC16.69■□□□□ 0.26
Msh6P54276 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.69■□□□□ 0.26
Msh6P54276 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Msh6P54276 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Msh6P54276 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Msh6P54276 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Msh6P54276 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.68■□□□□ 0.26
Msh6P54276 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.68■□□□□ 0.26
Msh6P54276 Gm14017-201ENSMUST00000121934 386 ntBASIC16.68■□□□□ 0.26
Msh6P54276 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.68■□□□□ 0.26
Msh6P54276 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Msh6P54276 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Msh6P54276 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Gm30285-201ENSMUST00000214614 422 ntBASIC16.68■□□□□ 0.26
Msh6P54276 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.68■□□□□ 0.26
Msh6P54276 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.68■□□□□ 0.26
Msh6P54276 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Msh6P54276 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh6P54276 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.67■□□□□ 0.26
Msh6P54276 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.67■□□□□ 0.26
Msh6P54276 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Msh6P54276 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.67■□□□□ 0.26
Msh6P54276 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Msh6P54276 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Msh6P54276 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Msh6P54276 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.67■□□□□ 0.26
Msh6P54276 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.67■□□□□ 0.26
Msh6P54276 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Msh6P54276 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.66■□□□□ 0.26
Msh6P54276 Gm10434-201ENSMUST00000101158 471 ntBASIC16.66■□□□□ 0.26
Msh6P54276 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Msh6P54276 Gm8738-201ENSMUST00000172606 329 ntBASIC16.66■□□□□ 0.26
Msh6P54276 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.66■□□□□ 0.26
Msh6P54276 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.66■□□□□ 0.26
Msh6P54276 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.66■□□□□ 0.26
Msh6P54276 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.66■□□□□ 0.26
Msh6P54276 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Msh6P54276 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms