Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.31□□□□□ -0.44
Thbs1P35441 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Thbs1P35441 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.31□□□□□ -0.44
Thbs1P35441 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.31□□□□□ -0.44
Thbs1P35441 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Thbs1P35441 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Thbs1P35441 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Thbs1P35441 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.31□□□□□ -0.44
Thbs1P35441 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.31□□□□□ -0.44
Thbs1P35441 Gm44855-201ENSMUST00000205725 362 ntBASIC12.31□□□□□ -0.44
Thbs1P35441 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.31□□□□□ -0.44
Thbs1P35441 Gm17872-201ENSMUST00000222550 532 ntBASIC12.31□□□□□ -0.44
Thbs1P35441 Gm19220-201ENSMUST00000222682 803 ntBASIC12.31□□□□□ -0.44
Thbs1P35441 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.31□□□□□ -0.44
Thbs1P35441 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Thbs1P35441 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs1P35441 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Thbs1P35441 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Thbs1P35441 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Thbs1P35441 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.3□□□□□ -0.44
Thbs1P35441 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.3□□□□□ -0.44
Thbs1P35441 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.3□□□□□ -0.44
Thbs1P35441 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Thbs1P35441 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Thbs1P35441 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.3□□□□□ -0.44
Thbs1P35441 Gm29608-201ENSMUST00000190444 463 ntBASIC12.3□□□□□ -0.44
Thbs1P35441 Gm42612-201ENSMUST00000197986 623 ntBASIC12.3□□□□□ -0.44
Thbs1P35441 Gm43170-201ENSMUST00000199827 612 ntBASIC12.3□□□□□ -0.44
Thbs1P35441 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Thbs1P35441 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.3□□□□□ -0.44
Thbs1P35441 AC102523.2-201ENSMUST00000227813 983 ntBASIC12.3□□□□□ -0.44
Thbs1P35441 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.3□□□□□ -0.44
Thbs1P35441 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Thbs1P35441 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Thbs1P35441 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Thbs1P35441 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.3□□□□□ -0.44
Thbs1P35441 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs1P35441 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs1P35441 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Thbs1P35441 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.29□□□□□ -0.44
Thbs1P35441 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms