Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.93□□□□□ -0.5
Ctla2aP12399 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.93□□□□□ -0.5
Ctla2aP12399 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.93□□□□□ -0.5
Ctla2aP12399 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ctla2aP12399 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctla2aP12399 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.92□□□□□ -0.5
Ctla2aP12399 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.92□□□□□ -0.5
Ctla2aP12399 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.92□□□□□ -0.5
Ctla2aP12399 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.92□□□□□ -0.5
Ctla2aP12399 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ctla2aP12399 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.92□□□□□ -0.5
Ctla2aP12399 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ctla2aP12399 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.91□□□□□ -0.5
Ctla2aP12399 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.91□□□□□ -0.5
Ctla2aP12399 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ctla2aP12399 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms