Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Mir7654-201ENSMUST00000185082 70 ntBASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.48□□□□□ -0.09
Chmp6P0C0A3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp6P0C0A3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp6P0C0A3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Gm45384-201ENSMUST00000210451 277 ntBASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Gm5161-201ENSMUST00000075243 853 ntBASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Chmp6P0C0A3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp6P0C0A3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp6P0C0A3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp6P0C0A3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp6P0C0A3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp6P0C0A3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp6P0C0A3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Gm13689-201ENSMUST00000119360 685 ntBASIC14.45□□□□□ -0.1
Chmp6P0C0A3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms