Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ctla4P09793 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.33□□□□□ -0.44
Ctla4P09793 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Gm6447-201ENSMUST00000118905 835 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.33□□□□□ -0.44
Ctla4P09793 Gm11425-201ENSMUST00000119608 498 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.33□□□□□ -0.44
Ctla4P09793 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ctla4P09793 Gm7561-201ENSMUST00000211203 886 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.33□□□□□ -0.44
Ctla4P09793 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ctla4P09793 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Gm9396-201ENSMUST00000076703 567 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Gm10012-201ENSMUST00000078252 192 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Gm25857-201ENSMUST00000082788 129 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ctla4P09793 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.33□□□□□ -0.44
Ctla4P09793 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctla4P09793 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ctla4P09793 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ctla4P09793 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ctla4P09793 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.32□□□□□ -0.44
Ctla4P09793 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.32□□□□□ -0.44
Ctla4P09793 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Gm14350-201ENSMUST00000116642 640 ntBASIC12.32□□□□□ -0.44
Ctla4P09793 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.32□□□□□ -0.44
Ctla4P09793 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.32□□□□□ -0.44
Ctla4P09793 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Gm24196-201ENSMUST00000179161 110 ntBASIC12.32□□□□□ -0.44
Ctla4P09793 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.32□□□□□ -0.44
Ctla4P09793 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ctla4P09793 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctla4P09793 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ctla4P09793 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.32□□□□□ -0.44
Ctla4P09793 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctla4P09793 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ctla4P09793 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ctla4P09793 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctla4P09793 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctla4P09793 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms