Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CfdP03953 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.09□□□□□ -0.63
CfdP03953 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.09□□□□□ -0.63
CfdP03953 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.09□□□□□ -0.63
CfdP03953 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CfdP03953 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CfdP03953 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CfdP03953 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.09□□□□□ -0.63
CfdP03953 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CfdP03953 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CfdP03953 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
CfdP03953 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CfdP03953 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CfdP03953 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.08□□□□□ -0.64
CfdP03953 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.08□□□□□ -0.64
CfdP03953 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Gm15770-201ENSMUST00000117498 584 ntBASIC11.08□□□□□ -0.64
CfdP03953 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.08□□□□□ -0.64
CfdP03953 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CfdP03953 Mir8117-201ENSMUST00000184773 107 ntBASIC11.08□□□□□ -0.64
CfdP03953 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Gm21470-201ENSMUST00000187680 696 ntBASIC11.08□□□□□ -0.64
CfdP03953 Gm18766-201ENSMUST00000189811 808 ntBASIC11.08□□□□□ -0.64
CfdP03953 Gm33320-201ENSMUST00000192232 530 ntBASIC11.08□□□□□ -0.64
CfdP03953 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.08□□□□□ -0.64
CfdP03953 Gm16476-201ENSMUST00000221544 139 ntBASIC11.08□□□□□ -0.64
CfdP03953 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CfdP03953 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.08□□□□□ -0.64
CfdP03953 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.08□□□□□ -0.64
CfdP03953 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CfdP03953 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CfdP03953 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CfdP03953 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CfdP03953 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.07□□□□□ -0.64
CfdP03953 Gm6912-201ENSMUST00000117218 544 ntBASIC11.07□□□□□ -0.64
CfdP03953 Gm15460-201ENSMUST00000118147 391 ntBASIC11.07□□□□□ -0.64
CfdP03953 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.07□□□□□ -0.64
CfdP03953 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Gm29541-201ENSMUST00000191351 678 ntBASIC11.07□□□□□ -0.64
CfdP03953 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.07□□□□□ -0.64
CfdP03953 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.07□□□□□ -0.64
CfdP03953 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.07□□□□□ -0.64
CfdP03953 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
CfdP03953 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CfdP03953 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.07□□□□□ -0.64
CfdP03953 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.07□□□□□ -0.64
CfdP03953 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.07□□□□□ -0.64
CfdP03953 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CfdP03953 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms