Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TcraP01849 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TcraP01849 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.68□□□□□ -0.86
TcraP01849 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.68□□□□□ -0.86
TcraP01849 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.68□□□□□ -0.86
TcraP01849 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TcraP01849 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.68□□□□□ -0.86
TcraP01849 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TcraP01849 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.68□□□□□ -0.86
TcraP01849 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gm11543-201ENSMUST00000120758 370 ntBASIC9.68□□□□□ -0.86
TcraP01849 Mir8117-201ENSMUST00000184773 107 ntBASIC9.68□□□□□ -0.86
TcraP01849 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.68□□□□□ -0.86
TcraP01849 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gm45683-201ENSMUST00000210825 1247 ntBASIC9.68□□□□□ -0.86
TcraP01849 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TcraP01849 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC9.68□□□□□ -0.86
TcraP01849 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.68□□□□□ -0.86
TcraP01849 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TcraP01849 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
TcraP01849 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TcraP01849 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.68□□□□□ -0.86
TcraP01849 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.68□□□□□ -0.86
TcraP01849 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.68□□□□□ -0.86
TcraP01849 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.68□□□□□ -0.86
TcraP01849 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
TcraP01849 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TcraP01849 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.68□□□□□ -0.86
TcraP01849 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TcraP01849 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.67□□□□□ -0.86
TcraP01849 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.67□□□□□ -0.86
TcraP01849 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
TcraP01849 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
TcraP01849 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.67□□□□□ -0.86
TcraP01849 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.67□□□□□ -0.86
TcraP01849 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC9.67□□□□□ -0.86
TcraP01849 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
TcraP01849 Mir3113-201ENSMUST00000175478 76 ntBASIC9.67□□□□□ -0.86
TcraP01849 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.67□□□□□ -0.86
TcraP01849 Gm44719-201ENSMUST00000206404 149 ntBASIC9.67□□□□□ -0.86
TcraP01849 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC9.67□□□□□ -0.86
TcraP01849 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC9.67□□□□□ -0.86
TcraP01849 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TcraP01849 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
TcraP01849 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms