Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.65□□□□□ -0.22
Syn1O88935 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Syn1O88935 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syn1O88935 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syn1O88935 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syn1O88935 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syn1O88935 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.65□□□□□ -0.22
Syn1O88935 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syn1O88935 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syn1O88935 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syn1O88935 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Syn1O88935 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Syn1O88935 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.64□□□□□ -0.23
Syn1O88935 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Syn1O88935 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.64□□□□□ -0.23
Syn1O88935 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.64□□□□□ -0.23
Syn1O88935 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Gm23200-201ENSMUST00000104379 132 ntBASIC13.64□□□□□ -0.23
Syn1O88935 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Syn1O88935 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.64□□□□□ -0.23
Syn1O88935 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.64□□□□□ -0.23
Syn1O88935 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syn1O88935 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Gm5051-201ENSMUST00000204085 485 ntBASIC13.64□□□□□ -0.23
Syn1O88935 Gm44069-201ENSMUST00000204898 506 ntBASIC13.64□□□□□ -0.23
Syn1O88935 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.64□□□□□ -0.23
Syn1O88935 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Syn1O88935 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syn1O88935 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Syn1O88935 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.64□□□□□ -0.23
Syn1O88935 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syn1O88935 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Syn1O88935 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Syn1O88935 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Syn1O88935 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Snord83b-201ENSMUST00000104546 94 ntBASIC13.63□□□□□ -0.23
Syn1O88935 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Syn1O88935 Gm13665-201ENSMUST00000120830 528 ntBASIC13.63□□□□□ -0.23
Syn1O88935 Gm26361-201ENSMUST00000158868 186 ntBASIC13.63□□□□□ -0.23
Syn1O88935 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Gm4768-201ENSMUST00000206199 686 ntBASIC13.63□□□□□ -0.23
Syn1O88935 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.63□□□□□ -0.23
Syn1O88935 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
Syn1O88935 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Syn1O88935 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.63□□□□□ -0.23
Syn1O88935 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syn1O88935 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.62□□□□□ -0.23
Syn1O88935 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syn1O88935 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syn1O88935 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.62□□□□□ -0.23
Syn1O88935 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syn1O88935 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syn1O88935 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syn1O88935 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.62□□□□□ -0.23
Syn1O88935 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syn1O88935 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Syn1O88935 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms