Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col5a1O88207 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.8□□□□□ -0.52
Col5a1O88207 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.8□□□□□ -0.52
Col5a1O88207 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Col5a1O88207 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.8□□□□□ -0.52
Col5a1O88207 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col5a1O88207 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col5a1O88207 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.8□□□□□ -0.52
Col5a1O88207 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.8□□□□□ -0.52
Col5a1O88207 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Col5a1O88207 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Col5a1O88207 Gm19459-201ENSMUST00000176240 835 ntBASIC11.8□□□□□ -0.52
Col5a1O88207 Gm9211-201ENSMUST00000182882 975 ntBASIC11.8□□□□□ -0.52
Col5a1O88207 Gm19931-201ENSMUST00000198920 368 ntBASIC11.8□□□□□ -0.52
Col5a1O88207 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.8□□□□□ -0.52
Col5a1O88207 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.8□□□□□ -0.52
Col5a1O88207 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.8□□□□□ -0.52
Col5a1O88207 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col5a1O88207 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col5a1O88207 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col5a1O88207 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col5a1O88207 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Gm11531-201ENSMUST00000117614 555 ntBASIC11.79□□□□□ -0.52
Col5a1O88207 Gm14109-201ENSMUST00000118814 309 ntBASIC11.79□□□□□ -0.52
Col5a1O88207 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.79□□□□□ -0.52
Col5a1O88207 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.79□□□□□ -0.52
Col5a1O88207 Gm17208-201ENSMUST00000168388 535 ntBASIC11.79□□□□□ -0.52
Col5a1O88207 Gm9540-201ENSMUST00000188230 478 ntBASIC11.79□□□□□ -0.52
Col5a1O88207 Gm45224-201ENSMUST00000208203 414 ntBASIC11.79□□□□□ -0.52
Col5a1O88207 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.79□□□□□ -0.52
Col5a1O88207 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.79□□□□□ -0.52
Col5a1O88207 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC11.79□□□□□ -0.52
Col5a1O88207 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col5a1O88207 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col5a1O88207 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.79□□□□□ -0.52
Col5a1O88207 Gm14665-201ENSMUST00000122294 557 ntBASIC11.79□□□□□ -0.52
Col5a1O88207 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.79□□□□□ -0.52
Col5a1O88207 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.79□□□□□ -0.52
Col5a1O88207 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.79□□□□□ -0.52
Col5a1O88207 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.79□□□□□ -0.52
Col5a1O88207 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Col5a1O88207 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col5a1O88207 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col5a1O88207 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col5a1O88207 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col5a1O88207 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col5a1O88207 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col5a1O88207 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.78□□□□□ -0.52
Col5a1O88207 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col5a1O88207 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col5a1O88207 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.78□□□□□ -0.52
Col5a1O88207 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col5a1O88207 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col5a1O88207 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.78□□□□□ -0.52
Col5a1O88207 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col5a1O88207 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms