Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ubr1O70481 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr1O70481 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ubr1O70481 Mir5132-201ENSMUST00000175166 71 ntBASIC16.9■□□□□ 0.3
Ubr1O70481 Gm18212-201ENSMUST00000211678 889 ntBASIC16.9■□□□□ 0.3
Ubr1O70481 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr1O70481 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr1O70481 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.9■□□□□ 0.3
Ubr1O70481 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ubr1O70481 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr1O70481 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ubr1O70481 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr1O70481 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ubr1O70481 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.9■□□□□ 0.3
Ubr1O70481 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ubr1O70481 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.3
Ubr1O70481 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ubr1O70481 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ubr1O70481 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ubr1O70481 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.89■□□□□ 0.3
Ubr1O70481 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.89■□□□□ 0.3
Ubr1O70481 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.89■□□□□ 0.3
Ubr1O70481 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.89■□□□□ 0.3
Ubr1O70481 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.89■□□□□ 0.3
Ubr1O70481 Gzmn-202ENSMUST00000225535 989 ntBASIC16.89■□□□□ 0.3
Ubr1O70481 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.89■□□□□ 0.3
Ubr1O70481 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ubr1O70481 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.89■□□□□ 0.29
Ubr1O70481 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Ubr1O70481 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ubr1O70481 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.89■□□□□ 0.29
Ubr1O70481 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.89■□□□□ 0.29
Ubr1O70481 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.89■□□□□ 0.29
Ubr1O70481 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Gm37666-201ENSMUST00000194110 866 ntBASIC16.89■□□□□ 0.29
Ubr1O70481 Gm43947-201ENSMUST00000203019 959 ntBASIC16.89■□□□□ 0.29
Ubr1O70481 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.89■□□□□ 0.29
Ubr1O70481 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ubr1O70481 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ubr1O70481 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr1O70481 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr1O70481 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr1O70481 Mir874-201ENSMUST00000104769 76 ntBASIC16.88■□□□□ 0.29
Ubr1O70481 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Ubr1O70481 Gm12314-201ENSMUST00000118104 538 ntBASIC16.88■□□□□ 0.29
Ubr1O70481 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.88■□□□□ 0.29
Ubr1O70481 Gm28450-201ENSMUST00000187349 638 ntBASIC16.88■□□□□ 0.29
Ubr1O70481 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr1O70481 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.88■□□□□ 0.29
Ubr1O70481 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ubr1O70481 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr1O70481 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.88■□□□□ 0.29
Ubr1O70481 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr1O70481 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.88■□□□□ 0.29
Ubr1O70481 Gm12380-201ENSMUST00000119012 544 ntBASIC16.87■□□□□ 0.29
Ubr1O70481 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.87■□□□□ 0.29
Ubr1O70481 Gm18734-201ENSMUST00000172937 808 ntBASIC16.87■□□□□ 0.29
Ubr1O70481 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.87■□□□□ 0.29
Ubr1O70481 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.87■□□□□ 0.29
Ubr1O70481 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC16.87■□□□□ 0.29
Ubr1O70481 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Ubr1O70481 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ubr1O70481 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ubr1O70481 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.87■□□□□ 0.29
Ubr1O70481 Gm27023-201ENSMUST00000182372 285 ntBASIC16.87■□□□□ 0.29
Ubr1O70481 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr1O70481 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.87■□□□□ 0.29
Ubr1O70481 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.87■□□□□ 0.29
Ubr1O70481 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ubr1O70481 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubr1O70481 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms