Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Npc1O35604 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Npc1O35604 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.97□□□□□ -0.33
Npc1O35604 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npc1O35604 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Npc1O35604 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.96□□□□□ -0.33
Npc1O35604 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.96□□□□□ -0.33
Npc1O35604 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Npc1O35604 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Npc1O35604 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.96□□□□□ -0.33
Npc1O35604 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.96□□□□□ -0.33
Npc1O35604 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Gm13829-201ENSMUST00000119600 138 ntBASIC12.96□□□□□ -0.33
Npc1O35604 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.96□□□□□ -0.33
Npc1O35604 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.96□□□□□ -0.33
Npc1O35604 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.96□□□□□ -0.33
Npc1O35604 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.96□□□□□ -0.33
Npc1O35604 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Npc1O35604 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Npc1O35604 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.96□□□□□ -0.33
Npc1O35604 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npc1O35604 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.96□□□□□ -0.33
Npc1O35604 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Npc1O35604 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npc1O35604 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npc1O35604 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npc1O35604 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npc1O35604 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npc1O35604 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npc1O35604 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.96□□□□□ -0.34
Npc1O35604 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.96□□□□□ -0.34
Npc1O35604 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npc1O35604 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.96□□□□□ -0.34
Npc1O35604 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Npc1O35604 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Npc1O35604 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.95□□□□□ -0.34
Npc1O35604 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Npc1O35604 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Gm12403-201ENSMUST00000121384 959 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.95□□□□□ -0.34
Npc1O35604 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.95□□□□□ -0.34
Npc1O35604 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.95□□□□□ -0.34
Npc1O35604 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.95□□□□□ -0.34
Npc1O35604 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npc1O35604 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms