Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm12896-201ENSMUST00000118430 226 ntBASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm37580-201ENSMUST00000192408 2800 ntBASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 AC166359.1-201ENSMUST00000220243 1871 ntBASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Gm3880A0A1B0GSB3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm7507-201ENSMUST00000183053 1008 ntBASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm42555-201ENSMUST00000199304 1039 ntBASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 AC164567.1-201ENSMUST00000219185 960 ntBASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 AC158538.2-201ENSMUST00000225455 906 ntBASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm43727-201ENSMUST00000198021 2647 ntBASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Gm3880A0A1B0GSB3 Gm44758-201ENSMUST00000206096 2068 ntBASIC6.41□□□□□ -1.38
Gm3880A0A1B0GSB3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm3880A0A1B0GSB3 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm3880A0A1B0GSB3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms