Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gm6756-201ENSMUST00000180647 1620 ntBASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 AC124751.1-201ENSMUST00000222716 1408 ntBASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Igkv8-27A0A0G2JF28 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gm37014-201ENSMUST00000194723 2253 ntBASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Igkv8-27A0A0G2JF28 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Igkv8-27A0A0G2JF28 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Igkv8-27A0A0G2JF28 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Igkv8-27A0A0G2JF28 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Igkv8-27A0A0G2JF28 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Igkv8-27A0A0G2JF28 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC8.27□□□□□ -1.08
Igkv8-27A0A0G2JF28 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Igkv8-27A0A0G2JF28 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
Igkv8-27A0A0G2JF28 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Igkv8-27A0A0G2JF28 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm44357-201ENSMUST00000195897 142 ntBASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm19658-201ENSMUST00000196231 138 ntBASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm44367-201ENSMUST00000196836 138 ntBASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm44350-201ENSMUST00000197197 138 ntBASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm44390-201ENSMUST00000197533 144 ntBASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm44313-201ENSMUST00000198018 138 ntBASIC8.27□□□□□ -1.09
Igkv8-27A0A0G2JF28 Gm44486-201ENSMUST00000198508 138 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms