Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm13730-201ENSMUST00000121036 1462 ntBASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm15376-201ENSMUST00000122258 783 ntBASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm25925-201ENSMUST00000158314 306 ntBASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 AC125206.2-201ENSMUST00000217454 574 ntBASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Syt7-205ENSMUST00000224135 1557 ntBASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm22189-201ENSMUST00000103822 86 ntBASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm11524-201ENSMUST00000119349 807 ntBASIC9.65□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms