Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm7336-201ENSMUST00000107041 1232 ntBASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 AC102291.3-201ENSMUST00000226566 405 ntBASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav6n-6A0A075B6B2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm13015-201ENSMUST00000118674 204 ntBASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm13823-201ENSMUST00000119930 345 ntBASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm18766-201ENSMUST00000189811 808 ntBASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav6n-6A0A075B6B2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav6n-6A0A075B6B2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms