Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Gm28630-201ENSMUST00000187806 498 ntBASIC10.68□□□□□ -0.7
Gm12728V9GX31 Gm10253-201ENSMUST00000194270 940 ntBASIC10.68□□□□□ -0.7
Gm12728V9GX31 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.68□□□□□ -0.7
Gm12728V9GX31 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.68□□□□□ -0.7
Gm12728V9GX31 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm12728V9GX31 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Gm15393-201ENSMUST00000120499 219 ntBASIC10.67□□□□□ -0.7
Gm12728V9GX31 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Gm27622-201ENSMUST00000183779 60 ntBASIC10.67□□□□□ -0.7
Gm12728V9GX31 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.67□□□□□ -0.7
Gm12728V9GX31 Gm9229-201ENSMUST00000222777 126 ntBASIC10.67□□□□□ -0.7
Gm12728V9GX31 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.67□□□□□ -0.7
Gm12728V9GX31 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12728V9GX31 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12728V9GX31 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12728V9GX31 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12728V9GX31 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12728V9GX31 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms