Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Gm38225-201ENSMUST00000194001 393 ntBASIC10.22□□□□□ -0.77
PdfS4R2K0 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.22□□□□□ -0.77
PdfS4R2K0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.21□□□□□ -0.77
PdfS4R2K0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
PdfS4R2K0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.21□□□□□ -0.77
PdfS4R2K0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.21□□□□□ -0.77
PdfS4R2K0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
PdfS4R2K0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
PdfS4R2K0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.21□□□□□ -0.77
PdfS4R2K0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PdfS4R2K0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.21□□□□□ -0.77
PdfS4R2K0 Gm2445-201ENSMUST00000182798 989 ntBASIC10.21□□□□□ -0.77
PdfS4R2K0 Gm43474-201ENSMUST00000196415 774 ntBASIC10.21□□□□□ -0.77
PdfS4R2K0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.21□□□□□ -0.77
PdfS4R2K0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
PdfS4R2K0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
PdfS4R2K0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
PdfS4R2K0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PdfS4R2K0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.21□□□□□ -0.78
PdfS4R2K0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PdfS4R2K0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
PdfS4R2K0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
PdfS4R2K0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
PdfS4R2K0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.21□□□□□ -0.78
PdfS4R2K0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
PdfS4R2K0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
PdfS4R2K0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.21□□□□□ -0.78
PdfS4R2K0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
PdfS4R2K0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
PdfS4R2K0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PdfS4R2K0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
PdfS4R2K0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PdfS4R2K0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
PdfS4R2K0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
PdfS4R2K0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.2□□□□□ -0.78
PdfS4R2K0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
PdfS4R2K0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.2□□□□□ -0.78
PdfS4R2K0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
PdfS4R2K0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.2□□□□□ -0.78
PdfS4R2K0 Gm9824-201ENSMUST00000178707 561 ntBASIC10.2□□□□□ -0.78
PdfS4R2K0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.2□□□□□ -0.78
PdfS4R2K0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
PdfS4R2K0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms