Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lime1Q9EQR5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Gm12485-201ENSMUST00000119641 291 ntBASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Gm26464-201ENSMUST00000157094 305 ntBASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lime1Q9EQR5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Gm17837-201ENSMUST00000186435 985 ntBASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Gm43094-201ENSMUST00000196549 921 ntBASIC11.56□□□□□ -0.56
Lime1Q9EQR5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Lime1Q9EQR5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lime1Q9EQR5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lime1Q9EQR5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lime1Q9EQR5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lime1Q9EQR5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lime1Q9EQR5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lime1Q9EQR5 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms