Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Gm1401-201ENSMUST00000122048 772 ntBASIC13.32□□□□□ -0.28
Trim42Q9D2H5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Gm11025-201ENSMUST00000140773 466 ntBASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim42Q9D2H5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Gm27631-201ENSMUST00000184163 466 ntBASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Mir497b-201ENSMUST00000093601 125 ntBASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim42Q9D2H5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms