Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cotl1Q9CQI6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cotl1Q9CQI6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cotl1Q9CQI6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gm14140-201ENSMUST00000119999 995 ntBASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gm27301-201ENSMUST00000184012 127 ntBASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cotl1Q9CQI6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Mzt1-203ENSMUST00000227948 952 ntBASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cotl1Q9CQI6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.49□□□□□ -0.73
Cotl1Q9CQI6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms