Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Gm12341-201ENSMUST00000119724 503 ntBASIC13.25□□□□□ -0.29
Trim33Q99PP7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.25□□□□□ -0.29
Trim33Q99PP7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.25□□□□□ -0.29
Trim33Q99PP7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.24□□□□□ -0.29
Trim33Q99PP7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim33Q99PP7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.24□□□□□ -0.29
Trim33Q99PP7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.24□□□□□ -0.29
Trim33Q99PP7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim33Q99PP7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.23□□□□□ -0.29
Trim33Q99PP7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.23□□□□□ -0.29
Trim33Q99PP7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Mir6392-201ENSMUST00000184924 108 ntBASIC13.23□□□□□ -0.29
Trim33Q99PP7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.23□□□□□ -0.29
Trim33Q99PP7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim33Q99PP7 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.23□□□□□ -0.29
Trim33Q99PP7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Gm5403-201ENSMUST00000117105 2795 ntBASIC13.23□□□□□ -0.29
Trim33Q99PP7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim33Q99PP7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim33Q99PP7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim33Q99PP7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms