Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk5rap3Q99LM2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdk5rap3Q99LM2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk5rap3Q99LM2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk5rap3Q99LM2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk5rap3Q99LM2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm13616-201ENSMUST00000120600 222 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm12403-201ENSMUST00000121384 959 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap3Q99LM2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap3Q99LM2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms