Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Gm30285-201ENSMUST00000214614 422 ntBASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a4Q91VA1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Gm14704-201ENSMUST00000120300 874 ntBASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Mir7070-201ENSMUST00000183657 86 ntBASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc44a4Q91VA1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Gm11222-201ENSMUST00000119005 738 ntBASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Gm16570-201ENSMUST00000161951 436 ntBASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc44a4Q91VA1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Gm25214-201ENSMUST00000104573 129 ntBASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Slc44a4Q91VA1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms