Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atg4dQ8BGV9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Gm6091-201ENSMUST00000098307 165 ntBASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Atg4dQ8BGV9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gm24644-201ENSMUST00000157114 139 ntBASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4dQ8BGV9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms