Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.35■□□□□ 0.05
Scn9aQ62205 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.35■□□□□ 0.05
Scn9aQ62205 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.35■□□□□ 0.05
Scn9aQ62205 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.35■□□□□ 0.05
Scn9aQ62205 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.34■□□□□ 0.05
Scn9aQ62205 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Scn9aQ62205 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.34■□□□□ 0.05
Scn9aQ62205 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.34■□□□□ 0.05
Scn9aQ62205 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC15.34■□□□□ 0.05
Scn9aQ62205 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.34■□□□□ 0.05
Scn9aQ62205 Gm5070-201ENSMUST00000177599 862 ntBASIC15.34■□□□□ 0.05
Scn9aQ62205 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.34■□□□□ 0.05
Scn9aQ62205 Gm9540-201ENSMUST00000188230 478 ntBASIC15.34■□□□□ 0.05
Scn9aQ62205 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.34■□□□□ 0.05
Scn9aQ62205 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.34■□□□□ 0.05
Scn9aQ62205 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Scn9aQ62205 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn9aQ62205 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn9aQ62205 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn9aQ62205 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn9aQ62205 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn9aQ62205 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn9aQ62205 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn9aQ62205 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.33■□□□□ 0.05
Scn9aQ62205 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Scn9aQ62205 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Scn9aQ62205 Gm14665-201ENSMUST00000122294 557 ntBASIC15.33■□□□□ 0.05
Scn9aQ62205 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Scn9aQ62205 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.33■□□□□ 0.05
Scn9aQ62205 Gm5369-201ENSMUST00000217499 588 ntBASIC15.33■□□□□ 0.05
Scn9aQ62205 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Scn9aQ62205 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Scn9aQ62205 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn9aQ62205 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Scn9aQ62205 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.33■□□□□ 0.04
Scn9aQ62205 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn9aQ62205 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Scn9aQ62205 Gm32999-201ENSMUST00000192693 562 ntBASIC15.33■□□□□ 0.04
Scn9aQ62205 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
Scn9aQ62205 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.33■□□□□ 0.04
Scn9aQ62205 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Scn9aQ62205 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn9aQ62205 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.32■□□□□ 0.04
Scn9aQ62205 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.32■□□□□ 0.04
Scn9aQ62205 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Scn9aQ62205 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn9aQ62205 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.32■□□□□ 0.04
Scn9aQ62205 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn9aQ62205 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.32■□□□□ 0.04
Scn9aQ62205 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms