Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.85□□□□□ -0.19
Smarcd1Q61466 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.84□□□□□ -0.19
Smarcd1Q61466 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Gm16177-201ENSMUST00000120728 718 ntBASIC13.84□□□□□ -0.19
Smarcd1Q61466 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Mir7221-201ENSMUST00000184009 72 ntBASIC13.84□□□□□ -0.19
Smarcd1Q61466 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.84□□□□□ -0.19
Smarcd1Q61466 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd1Q61466 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcd1Q61466 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.83□□□□□ -0.19
Smarcd1Q61466 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcd1Q61466 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Smarcd1Q61466 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.83□□□□□ -0.2
Smarcd1Q61466 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 AY702102-202ENSMUST00000194651 1173 ntBASIC13.83□□□□□ -0.2
Smarcd1Q61466 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.83□□□□□ -0.2
Smarcd1Q61466 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.83□□□□□ -0.2
Smarcd1Q61466 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.83□□□□□ -0.2
Smarcd1Q61466 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd1Q61466 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarcd1Q61466 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd1Q61466 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.82□□□□□ -0.2
Smarcd1Q61466 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smarcd1Q61466 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms