Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Gm8410-201ENSMUST00000117225 605 ntBASIC12.7□□□□□ -0.38
Nr1h4Q60641 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nr1h4Q60641 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nr1h4Q60641 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Gm6415-201ENSMUST00000118488 348 ntBASIC12.69□□□□□ -0.38
Nr1h4Q60641 Gm25144-201ENSMUST00000179561 110 ntBASIC12.69□□□□□ -0.38
Nr1h4Q60641 Gm25352-201ENSMUST00000179815 110 ntBASIC12.69□□□□□ -0.38
Nr1h4Q60641 Gm27622-201ENSMUST00000183779 60 ntBASIC12.69□□□□□ -0.38
Nr1h4Q60641 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.69□□□□□ -0.38
Nr1h4Q60641 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.69□□□□□ -0.38
Nr1h4Q60641 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.69□□□□□ -0.38
Nr1h4Q60641 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.69□□□□□ -0.38
Nr1h4Q60641 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nr1h4Q60641 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms