Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Gm11524-201ENSMUST00000119349 807 ntBASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Gm26464-201ENSMUST00000157094 305 ntBASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Gm19078-201ENSMUST00000206311 727 ntBASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Gm18041-201ENSMUST00000218210 618 ntBASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Gm6218-201ENSMUST00000219812 628 ntBASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5d-4Q5R1F6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Gm15678-201ENSMUST00000117573 960 ntBASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Gm44855-201ENSMUST00000205725 362 ntBASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5d-4Q5R1F6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms