Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
Trim41Q5NCC3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Gm45770-201ENSMUST00000212105 616 ntBASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Gm43423-201ENSMUST00000198390 2094 ntBASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC23.01■■□□□ 1.27
Trim41Q5NCC3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim41Q5NCC3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim41Q5NCC3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Trim41Q5NCC3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim41Q5NCC3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim41Q5NCC3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim41Q5NCC3 Gm11658-201ENSMUST00000120913 1008 ntBASIC23■■□□□ 1.27
Trim41Q5NCC3 Gm2467-201ENSMUST00000182266 1010 ntBASIC23■■□□□ 1.27
Trim41Q5NCC3 Gm6981-201ENSMUST00000182467 1008 ntBASIC23■■□□□ 1.27
Trim41Q5NCC3 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC23■■□□□ 1.27
Trim41Q5NCC3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC23■■□□□ 1.27
Trim41Q5NCC3 Gm4768-201ENSMUST00000206199 686 ntBASIC23■■□□□ 1.27
Trim41Q5NCC3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC23■■□□□ 1.27
Trim41Q5NCC3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Trim41Q5NCC3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim41Q5NCC3 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC23■■□□□ 1.27
Trim41Q5NCC3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim41Q5NCC3 Gm3756-201ENSMUST00000169182 1355 ntBASIC23■■□□□ 1.27
Trim41Q5NCC3 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Gm44126-201ENSMUST00000204831 514 ntBASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Gm19163-201ENSMUST00000223313 780 ntBASIC22.99■■□□□ 1.27
Trim41Q5NCC3 AC022775.2-201ENSMUST00000227885 646 ntBASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim41Q5NCC3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm12012-201ENSMUST00000118857 1066 ntBASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm11978-201ENSMUST00000122315 466 ntBASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm28693-202ENSMUST00000190758 331 ntBASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm5869-201ENSMUST00000200248 1257 ntBASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm45219-201ENSMUST00000205602 465 ntBASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm37133-201ENSMUST00000192705 1922 ntBASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim41Q5NCC3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms