Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3aQ3ULJ3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Gm17208-201ENSMUST00000168388 535 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Gm26461-201ENSMUST00000175064 290 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Gm32025-201ENSMUST00000217960 307 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3aQ3ULJ3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Gm6458-201ENSMUST00000211573 635 ntBASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Upf3aQ3ULJ3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.92□□□□□ -0.18
Upf3aQ3ULJ3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upf3aQ3ULJ3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Upf3aQ3ULJ3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upf3aQ3ULJ3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upf3aQ3ULJ3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upf3aQ3ULJ3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upf3aQ3ULJ3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms