Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Gm43930-201ENSMUST00000203868 845 ntBASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Gm18056-201ENSMUST00000207670 568 ntBASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Gm18061-201ENSMUST00000208350 562 ntBASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Gm18063-201ENSMUST00000208529 568 ntBASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Gm18052-201ENSMUST00000208750 559 ntBASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Treml4Q3LRV9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm22018-201ENSMUST00000104357 131 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm29199-201ENSMUST00000187766 775 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm18935-201ENSMUST00000212692 664 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm9368-201ENSMUST00000219348 831 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm45930-201ENSMUST00000221330 292 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml4Q3LRV9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Treml4Q3LRV9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml4Q3LRV9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.5□□□□□ -0.41
Treml4Q3LRV9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml4Q3LRV9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml4Q3LRV9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Treml4Q3LRV9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml4Q3LRV9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.5□□□□□ -0.41
Treml4Q3LRV9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml4Q3LRV9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms