Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.91□□□□□ -0.66
Trim63Q38HM4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.91□□□□□ -0.66
Trim63Q38HM4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.9□□□□□ -0.66
Trim63Q38HM4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.9□□□□□ -0.66
Trim63Q38HM4 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Gm15358-201ENSMUST00000119249 520 ntBASIC10.9□□□□□ -0.66
Trim63Q38HM4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Gm27741-201ENSMUST00000185060 237 ntBASIC10.9□□□□□ -0.66
Trim63Q38HM4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Olfr286-202ENSMUST00000205305 969 ntBASIC10.9□□□□□ -0.66
Trim63Q38HM4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim63Q38HM4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trim63Q38HM4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trim63Q38HM4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trim63Q38HM4 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trim63Q38HM4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.9□□□□□ -0.67
Trim63Q38HM4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Trim63Q38HM4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.89□□□□□ -0.67
Trim63Q38HM4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.89□□□□□ -0.67
Trim63Q38HM4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.89□□□□□ -0.67
Trim63Q38HM4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.89□□□□□ -0.67
Trim63Q38HM4 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.89□□□□□ -0.67
Trim63Q38HM4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Daam2-202ENSMUST00000224595 1926 ntBASIC10.89□□□□□ -0.67
Trim63Q38HM4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim63Q38HM4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim63Q38HM4 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms