Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.15□□□□□ -0.46
Scn1bP97952 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Scn1bP97952 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1bP97952 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1bP97952 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1bP97952 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1bP97952 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1bP97952 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.15□□□□□ -0.47
Scn1bP97952 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1bP97952 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1bP97952 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Scn1bP97952 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.14□□□□□ -0.47
Scn1bP97952 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.14□□□□□ -0.47
Scn1bP97952 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.14□□□□□ -0.47
Scn1bP97952 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.14□□□□□ -0.47
Scn1bP97952 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scn1bP97952 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.14□□□□□ -0.47
Scn1bP97952 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Scn1bP97952 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1bP97952 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scn1bP97952 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Scn1bP97952 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn1bP97952 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.13□□□□□ -0.47
Scn1bP97952 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn1bP97952 Gm11543-201ENSMUST00000120758 370 ntBASIC12.13□□□□□ -0.47
Scn1bP97952 Gm27920-201ENSMUST00000183953 96 ntBASIC12.13□□□□□ -0.47
Scn1bP97952 Mir8117-201ENSMUST00000184773 107 ntBASIC12.13□□□□□ -0.47
Scn1bP97952 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn1bP97952 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Scn1bP97952 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn1bP97952 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.13□□□□□ -0.47
Scn1bP97952 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms