Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CiitaP79621 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.38□□□□□ -0.11
CiitaP79621 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CiitaP79621 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.38□□□□□ -0.11
CiitaP79621 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.38□□□□□ -0.11
CiitaP79621 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.38□□□□□ -0.11
CiitaP79621 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.38□□□□□ -0.11
CiitaP79621 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CiitaP79621 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.38□□□□□ -0.11
CiitaP79621 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.38□□□□□ -0.11
CiitaP79621 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.38□□□□□ -0.11
CiitaP79621 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.38□□□□□ -0.11
CiitaP79621 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.38□□□□□ -0.11
CiitaP79621 Gm19309-201ENSMUST00000218295 205 ntBASIC14.38□□□□□ -0.11
CiitaP79621 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.38□□□□□ -0.11
CiitaP79621 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.38□□□□□ -0.11
CiitaP79621 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CiitaP79621 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.38□□□□□ -0.11
CiitaP79621 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CiitaP79621 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.38□□□□□ -0.11
CiitaP79621 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CiitaP79621 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.37□□□□□ -0.11
CiitaP79621 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.37□□□□□ -0.11
CiitaP79621 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CiitaP79621 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CiitaP79621 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CiitaP79621 Gm16479-201ENSMUST00000121706 932 ntBASIC14.37□□□□□ -0.11
CiitaP79621 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CiitaP79621 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Gm5370-201ENSMUST00000187187 574 ntBASIC14.37□□□□□ -0.11
CiitaP79621 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.37□□□□□ -0.11
CiitaP79621 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.37□□□□□ -0.11
CiitaP79621 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Gm10478-201ENSMUST00000084451 396 ntBASIC14.37□□□□□ -0.11
CiitaP79621 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CiitaP79621 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CiitaP79621 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.37□□□□□ -0.11
CiitaP79621 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CiitaP79621 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CiitaP79621 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CiitaP79621 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms